PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776374.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 334aa MW: 37308.9 Da PI: 7.1526

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.9	1.7e-08	162	209	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq XP_022776374.1 162 SHSLAERIRREKISERMKILQCLVPGC----DKVTGKALMLDEIINYVQSLQ 209 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MAAFSYQPHP LLLDSIFLPN APTRVSGFME EGNINSNCFS QFYLPEPVQE SPLDHSSKVA 60 HSDNEPSVTK KQSTDDSTVV DKLESGEQVT RNVTLTDRKR RTRNGTALNS ARSKDAKEGK 120 SKKQKKCNDA LKSEKKDQKK SPEEPPTGYI HVRARRGQAT DSHSLAERIR REKISERMKI 180 LQCLVPGCDK VTGKALMLDE IINYVQSLQN QVEFLSMKLA SVNPIFYDFG VDLEALMVRP 240 ERLNSIASPL PSLQQCNPSQ PTAFLDTTTT NFAPDNNNYP LLDASAALLL HQGQRPNVFS 300 QPQDNGSLLW DVDEEPRQKF LSSSGLNDSL CSFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	125	RKRRTRNGTALNSARSKDAKEGKSKKQK
2	98	139	RKRRTRNGTALNSARSKDAKEGKSKKQKKCNDALKSEKKDQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	5e-64	bHLH family protein