PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776390.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 233aa MW: 25780.2 Da PI: 8.1173

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776390.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	1.9e-19	72	126	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++n++++ +++e LA +l+L rqV vWFqNrRa+ k XP_022776390.1 72 RKKLRLTKEQSRLLEESFRQNHTLNPKQKEALALQLNLRPRQVEVWFQNRRARSK 126 78889************************************************98 PP
2	HD-ZIP_I/II	118.2	4.6e-38	72	160	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL++eveeLr+ XP_022776390.1 72 RKKLRLTKEQSRLLEESFRQNHTLNPKQKEALALQLNLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRA 160 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MAVLPTCSSN LELTISVPGF SSSPFLPSSG DQVGSTVRDL DINQVPSGGA EDEWITASME 60 DEEESYNGAP PRKKLRLTKE QSRLLEESFR QNHTLNPKQK EALALQLNLR PRQVEVWFQN 120 RRARSKLKQT EMECEYLKRW FGSLTEQNRR LQREVEELRA MKVGPPTVIS PHSCEPLPAS 180 TLTMCPRCER VTTTALDKGP AKMNSATATA TATTLSSNVA TSALQSRPSS AAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	129	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	2e-75	HD-ZIP family protein