PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022776430.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 613aa    MW: 67154 Da    PI: 5.7345
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022776430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS455.33.7e-1392446031374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAeav++++l+la+al++++  la +++ +m+++a+yf+eALa+r++r    +y    p++  +++ s++l+++  f+e++P+lkf+h
  XP_022776430.1 244 LVHALMACAEAVQQNNLNLAEALVKQIGFLAISQAGAMRKVATYFAEALARRIYR----IY----PQNPLDHSLSDVLHMH--FYETCPYLKFAH 328
                     689****************************************************....55....4444445588888875..************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea+eg++ vH+iDf+++qG+QWpaL+qaLa R++gpp +R+Tg+g+p++++ + l+e+g++La++Ae+++v+fe++ +va++l+dl+
  XP_022776430.1 329 FTANQAILEAFEGKKSVHVIDFSMNQGMQWPALMQALALRAGGPPAFRLTGIGPPSHDNLDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLD 423
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                      ++L+++p   Ea+aVn+v++lh+ll+++v++++    vL++vk+++P++v++veqea+hn++ Flerf+e+l+yys+lfdsle ++   s++++
  XP_022776430.1 424 ASMLDLRPseVEAVAVNSVFELHKLLARPVAIDK----VLSMVKQMKPEIVTIVEQEANHNGPIFLERFTESLHYYSTLFDSLEGSV---SSQDK 511
                     ********8889**************99999999....************************************************7...9999* PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++++++lg++i+nvvaceg  r erhetl +Wr+rl++aGF pv+l+++a kqa++ll+ ++ ++gy vee++g+l+lgW++rpL+++SaW+
  XP_022776430.1 512 VMSEVYLGKQICNVVACEGMGRLERHETLTQWRNRLGSAGFAPVHLGSNAFKQASTLLALFAgGEGYGVEENNGCLMLGWHNRPLIATSAWK 603
                     *******************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 613 aa     Download sequence    
MKRGHHHLRP NPDPFTVGNS SLCGGSTTGK AKMWEEEAVQ QDCGMDELLA ALGYKVKTSD  60
MAEVAQKLEQ LEEVMCNVQD DGISQLASET VHYNPSDLST WLESMLSELN PPPTFDPVVA  120
AGTAAAAAAT LDDSFFGPAE SSTLTTLDFD NNNKKHKQQI LEEASCSDYD LKAIPGKAIY  180
SQKTQTHDSS SSTQNNVKPE KRLKSTSGSH SDIFPPTAVA SYGIPAESTR PVLLVDSQEN  240
GIRLVHALMA CAEAVQQNNL NLAEALVKQI GFLAISQAGA MRKVATYFAE ALARRIYRIY  300
PQNPLDHSLS DVLHMHFYET CPYLKFAHFT ANQAILEAFE GKKSVHVIDF SMNQGMQWPA  360
LMQALALRAG GPPAFRLTGI GPPSHDNLDH LQEVGWKLAQ LAETIHVEFE YRGFVANSLA  420
DLDASMLDLR PSEVEAVAVN SVFELHKLLA RPVAIDKVLS MVKQMKPEIV TIVEQEANHN  480
GPIFLERFTE SLHYYSTLFD SLEGSVSSQD KVMSEVYLGK QICNVVACEG MGRLERHETL  540
TQWRNRLGSA GFAPVHLGSN AFKQASTLLA LFAGGEGYGV EENNGCLMLG WHNRPLIATS  600
AWKLANKTTP VAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein