PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776563.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 219aa MW: 24907 Da PI: 6.174

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.7e-06	93	115	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+ksF+++ L H +H XP_022776563.1 93 YKCKTCDKSFKSPQALGGHKASH 115 9***************9999888 PP
2	zf-C2H2	11.7	0.0008	146	168	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+k+F + L H ++H XP_022776563.1 146 FECPFCDKVFQSGQALGGHKKVH 168 89********9999999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MEEKHRICKI CNRRFANGKA MVRLITCSNL MDLSMNFLAR LSFPLEDPND FVTAHHLTRD 60 KWPLEEVQKA EFLDDGGWDM DLDDDEDNPR TKYKCKTCDK SFKSPQALGG HKASHKNNRA 120 FTVEERKEDK GKESGGDYQI HQQRIFECPF CDKVFQSGQA LGGHKKVHFS YLSVAHSKMS 180 KTSSSTVQLF DLNLPASEDD DHDVVILVEN SMASADGEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	3e-26	C2H2 family protein