PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022776629.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 758aa    MW: 82938.1 Da    PI: 5.7702
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022776629.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.3e-2096151156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k
  XP_022776629.1  96 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMK 151
                     688999***********************************************999 PP
2START219.51.1e-682794991206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++elv++a+  ep+W++s     +++n++e++++f+++ +     ++ ea+r+++vv+m++   ve+l+d+  qW + +     ka+tl
  XP_022776629.1 279 ELAVAAMEELVRMAQICEPLWMTSLdgttSMLNEEEYIRTFPRGIGpkptgFKCEASRETAVVIMNHISIVEILMDVH-QWLTVFSgivsKASTL 372
                     57899**************************************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +v+s+g      galq+m+ae+q++splvp R++++vRy++q+ +g+w++vdvS+d  ++ p+    vR++++pSg++i++++ng+skvtw+ehv
  XP_022776629.1 373 DVLSTGvagnynGALQVMTAEFQVPSPLVPtRESYYVRYCKQHAEGTWAVVDVSLDDLRPCPT----VRCRRRPSGCIIQEMPNGYSKVTWIEHV 463
                     *************************************************************96....**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+ga++wvatl+rqce+
  XP_022776629.1 464 EVDDRGVHNLYKQLVSSGHAFGARRWVATLDRQCER 499
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 758 aa     Download sequence    
MPAGVMIPAR NMPSMISGNG TASGFGTSSG LTLGQIMFQP NNMMEGQLQP LEMTQNTSES  60
EIARMRDEEF DSTTKSGSEN HEGASGDDQD PRPNKKKRYH RHTQHQIQEM EAFFKECPHP  120
DDKQRKELGR ELGLEPLQVK FWFQNKRTQM KTQHERQENT QLRTENEKLR ADNMRYREAL  180
STASCPNCGG PTAIGQMSFD EHHLRLENAR LREEIDRISA IAAKYVGKPL VNYPLLSSPM  240
APRPLDFGAQ PGTGDMYGAG DLLRSISAPS EADKPMIIEL AVAAMEELVR MAQICEPLWM  300
TSLDGTTSML NEEEYIRTFP RGIGPKPTGF KCEASRETAV VIMNHISIVE ILMDVHQWLT  360
VFSGIVSKAS TLDVLSTGVA GNYNGALQVM TAEFQVPSPL VPTRESYYVR YCKQHAEGTW  420
AVVDVSLDDL RPCPTVRCRR RPSGCIIQEM PNGYSKVTWI EHVEVDDRGV HNLYKQLVSS  480
GHAFGARRWV ATLDRQCERL ASVMATNIPT GDIGVITNQD GRKSMLKLAE RMAISFCAGV  540
SASTAHTWTT LSGTGADDVR VMTRKSVDDP GRPPGIVLSA ATSFWLPVSP KRVFDFLRDE  600
NSRNEWDILS NGGVVQEMAH IANGRDTGNC VSLLRVNSAN SSQSNMLILQ ESCLDPTASF  660
VIYAPVDIVA MNVVLNGGDP DYVALLPSGF AILPDGTTSS TGGIADAGSG GSLLTVAFQI  720
LVDSVPTAKL SLGSVATVNN LIACTVERIK ASLSCENA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein