PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776673.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 542aa MW: 57631.3 Da PI: 5.9354

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.3	6.7e-09	358	406	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_022776673.1 358 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 406 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MDIGEKDKYQ APGMSSDWQF IGANLTSTPM SLVPSDNPLA IGSSCASASV VDSFASNLWE 60 HPSNSQNLGF SEIKLQNCAS SSNVTGIGKG GPTSLRSSID RPFGAASSMM KGGIFLPNAT 120 GILPQSLSQL PADSAFIERA ARFSSFNGGN FSDMVNPFGI PESMGLYTRG VALMQGPQDI 180 FAICGMKSVS GVESQKTKSN ATEASREACL QVENRATQES PLKNERKSES LVPSNEEAKQ 240 GTGGSGNESD ETEFSGDAGG QDEPSALDGI GGEPSAKGLS SKKRKRSVQG AELNQAKEGQ 300 SPIEAAKDSA ENQQKGDQNL TTTTNKTTGK QGKRGSQAAD PPKEEYIHVR ARRGQATNSH 360 SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN YVQSLQRQVE FLSMKLATVN 420 PRLDFNIEGL LAKDIIQSRA GPSSALGFSP DLSVGYPPLH PSQPGLVQGT LPVMGNNAGV 480 IHRTLSSHFT LMSGGFKEPN QLSNAWEDEL HNVVQMNYGT CAPSDSLEVN GSLPSGHMKP 540 EL

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MDIGEKDKYQ APGMSSDWQF IGANLTSTPM SLVPSDNPLA IGSSCASASV VDSFASNLWE  60
HPSNSQNLGF SEIKLQNCAS SSNVTGIGKG GPTSLRSSID RPFGAASSMM KGGIFLPNAT  120
GILPQSLSQL PADSAFIERA ARFSSFNGGN FSDMVNPFGI PESMGLYTRG VALMQGPQDI  180
FAICGMKSVS GVESQKTKSN ATEASREACL QVENRATQES PLKNERKSES LVPSNEEAKQ  240
GTGGSGNESD ETEFSGDAGG QDEPSALDGI GGEPSAKGLS SKKRKRSVQG AELNQAKEGQ  300
SPIEAAKDSA ENQQKGDQNL TTTTNKTTGK QGKRGSQAAD PPKEEYIHVR ARRGQATNSH  360
SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN YVQSLQRQVE FLSMKLATVN  420
PRLDFNIEGL LAKDIIQSRA GPSSALGFSP DLSVGYPPLH PSQPGLVQGT LPVMGNNAGV  480
IHRTLSSHFT LMSGGFKEPN QLSNAWEDEL HNVVQMNYGT CAPSDSLEVN GSLPSGHMKP  540
EL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	287	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-125	bHLH family protein