PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776711.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 511aa MW: 56574.7 Da PI: 7.9755

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.7	2.2e-40	171	246	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv gC+ dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk XP_022776711.1 171 CCQVYGCNRDLSSSKDYHKRHKVCEAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKL 246 6*************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MESWSYGSEG KGLFFTDEMD LPVDAFARSR KALVGWDLKP ATDFEAIESM EFMDFGFADM 60 NKKPFYGNTS MGIFGAEFGN DSSKRVVSPV CMINSSSYYG EEESGSKHSS SLIESNSQES 120 SLIDLKLGRL TEYRDGQDGK FFKETSVVSS VSPALMAKKA RTTSSFFHAP CCQVYGCNRD 180 LSSSKDYHKR HKVCEAHSKT AKVIVNGIEQ RFCQQCSRFH LLAEFDDGKR SCRKRLAGHN 240 ERRRKLHFNS LSGKPHKLLQ SYHGTKYLGS PMPKRMPSAI PNIFQGDFIC PGRYEHANQC 300 QRVKYEEKPI YSPQSAIPIT NGELLPKSFF HVHGSGKQYV PGTFSSATEA FNAPNAASIV 360 KELSGVSRLD CALSLLSAQS QDSLSHATGI QMTRPLINQA NLAYHSSEKS AAVTSMEKVN 420 DLYSCGMNPV GVGQAGSVLL SDSGHTVSFE VQADGYFQDS GLLSARHCLS PENGTTVDLL 480 QLSTHLQRVE RQRNPMQVKQ ENEGLCYFLT T

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MESWSYGSEG KGLFFTDEMD LPVDAFARSR KALVGWDLKP ATDFEAIESM EFMDFGFADM  60
NKKPFYGNTS MGIFGAEFGN DSSKRVVSPV CMINSSSYYG EEESGSKHSS SLIESNSQES  120
SLIDLKLGRL TEYRDGQDGK FFKETSVVSS VSPALMAKKA RTTSSFFHAP CCQVYGCNRD  180
LSSSKDYHKR HKVCEAHSKT AKVIVNGIEQ RFCQQCSRFH LLAEFDDGKR SCRKRLAGHN  240
ERRRKLHFNS LSGKPHKLLQ SYHGTKYLGS PMPKRMPSAI PNIFQGDFIC PGRYEHANQC  300
QRVKYEEKPI YSPQSAIPIT NGELLPKSFF HVHGSGKQYV PGTFSSATEA FNAPNAASIV  360
KELSGVSRLD CALSLLSAQS QDSLSHATGI QMTRPLINQA NLAYHSSEKS AAVTSMEKVN  420
DLYSCGMNPV GVGQAGSVLL SDSGHTVSFE VQADGYFQDS GLLSARHCLS PENGTTVDLL  480
QLSTHLQRVE RQRNPMQVKQ ENEGLCYFLT T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	2e-50	SBP family protein