PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776712.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

YABBY

Protein Properties

Length: 183aa MW: 20226.2 Da PI: 9.613

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	59.7	1.3e-18	9	55	1	47
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtslls 47 +d++ +se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l XP_022776712.1 9 MDLVPQSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSF 55 578899*************************************9854 PP
2	YABBY	99.7	6.3e-31	80	150	93	163
YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +++ ss + s+++d ++p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + XP_022776712.1 80 EKQSSSPSSSTSRDPSSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 150 3344444558899999*****************************************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MNLEEKVGMD LVPQSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRS 60 PLQGQCLDPQ TSLIGFMCKE KQSSSPSSST SRDPSSPKAP FVVKPPEKKH RLPSAYNRFM 120 KEEIQRIKAA NPEIPHREAF SAAAKNWARY IPNSPAASSV SGNSSNEITK SSPLKKHIFF 180 QVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	3e-61	YABBY family protein