PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776847.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 442aa MW: 49197.4 Da PI: 7.4098

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3e-16	135	180	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_022776847.1 135 RGHWRPAEDTKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 180 899***************************.*********996 PP
2	Myb_DNA-binding	57.2	3.7e-18	187	230	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l +a++++G++ W+ Iar ++ gRt++ +k++w+ XP_022776847.1 187 RRAFTEEEEERLMQAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 230 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MNRLSCHSST PSSSSPRSSM GMVYPDMGSL SLGQNYGMVG SSVSSSQDSY ACKGSEVENE 60 RVYWGFHFMG NCKTRSFEEN HSSDVVERKG SDCSDGFGDD NRNINLNANS NEENLNQNAV 120 SGKETDSGQS KLCARGHWRP AEDTKLKELV ALYGPQNWNL IAEKLEGRSG KSCRLRWFNQ 180 LDPRINRRAF TEEEEERLMQ AHRLYGNKWA MIARLFPGRT DNAVKNHWHV IMARKYREQS 240 TAYRRRKLSQ SVYGRMEENP NFVCTDAATR AEPHPYCLNI PNKGLGIISQ YQFGTFNGAD 300 GGVNGSSSIS SHMTSGKEEI SSSEVPRHNG FCAQQAPFDF FPGLKSNDMM GMFSQTRSWD 360 RPIDEPQISG FYPHHHHSSY MMAMQQSEFL SSQSLTDSTA STAQVSASEP SSSVAGSRAA 420 SSHSHYKTVP PPFIDFLGVG AT

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MNRLSCHSST PSSSSPRSSM GMVYPDMGSL SLGQNYGMVG SSVSSSQDSY ACKGSEVENE  60
RVYWGFHFMG NCKTRSFEEN HSSDVVERKG SDCSDGFGDD NRNINLNANS NEENLNQNAV  120
SGKETDSGQS KLCARGHWRP AEDTKLKELV ALYGPQNWNL IAEKLEGRSG KSCRLRWFNQ  180
LDPRINRRAF TEEEEERLMQ AHRLYGNKWA MIARLFPGRT DNAVKNHWHV IMARKYREQS  240
TAYRRRKLSQ SVYGRMEENP NFVCTDAATR AEPHPYCLNI PNKGLGIISQ YQFGTFNGAD  300
GGVNGSSSIS SHMTSGKEEI SSSEVPRHNG FCAQQAPFDF FPGLKSNDMM GMFSQTRSWD  360
RPIDEPQISG FYPHHHHSSY MMAMQQSEFL SSQSLTDSTA STAQVSASEP SSSVAGSRAA  420
SSHSHYKTVP PPFIDFLGVG AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	8e-78	MYB family protein