PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776904.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 481aa MW: 54173.6 Da PI: 7.3826

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.5	1.5e-13	27	71	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W +eEd++l + + ++G+++W+ Ia+++ +t qc+ rw++yl XP_022776904.1 27 TWNQEEDDILREQISLHGTENWAIIASKFK-DKTTRQCRRRWYTYL 71 6**************************9.***********97 PP
2	Myb_DNA-binding	43.6	6.7e-14	77	120	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_022776904.1 77 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 120 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MQETKKKNGG GGGGNEDSKK KERHIVTWNQ EEDDILREQI SLHGTENWAI IASKFKDKTT 60 RQCRRRWYTY LNSDFKKGGW SPEEDMLLCE AQKIFGNRWT EIAKVVSGRT DNAVKNRFST 120 LCKKRAKYEA LVKENNTSCI NPNNKRILLQ DGFNTDGTAE CVAPVKRMRR SHISDLSETF 180 NFGDRAHGVS GTIINQHLRH PFAVLGQNLH NVHNVVVQSQ VNNVKEVSND AQNNRTQGTF 240 LKKDDPKVTA LMQQAELLSS LALKVNTDNT EQSLENAWKV LQDFLNQSKE NDIFRYTISD 300 IDFQLEDFKD LLEDLRSSNE GNRPSWRQPD LYEASPASSE YSTGSTLMPH PAGEKGQENQ 360 AKIDALHRDI LSSHIGEQNC RNEEEKMALS SAKINHVEIV PSCDDQKNIM VAPNSSSAEF 420 SSPVHVTPLF RSLAAGIPSP KFSESERNFL LKTLGMESPS PNPANNLSQP PPCKRVLLHS 480 L

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MQETKKKNGG GGGGNEDSKK KERHIVTWNQ EEDDILREQI SLHGTENWAI IASKFKDKTT  60
RQCRRRWYTY LNSDFKKGGW SPEEDMLLCE AQKIFGNRWT EIAKVVSGRT DNAVKNRFST  120
LCKKRAKYEA LVKENNTSCI NPNNKRILLQ DGFNTDGTAE CVAPVKRMRR SHISDLSETF  180
NFGDRAHGVS GTIINQHLRH PFAVLGQNLH NVHNVVVQSQ VNNVKEVSND AQNNRTQGTF  240
LKKDDPKVTA LMQQAELLSS LALKVNTDNT EQSLENAWKV LQDFLNQSKE NDIFRYTISD  300
IDFQLEDFKD LLEDLRSSNE GNRPSWRQPD LYEASPASSE YSTGSTLMPH PAGEKGQENQ  360
AKIDALHRDI LSSHIGEQNC RNEEEKMALS SAKINHVEIV PSCDDQKNIM VAPNSSSAEF  420
SSPVHVTPLF RSLAAGIPSP KFSESERNFL LKTLGMESPS PNPANNLSQP PPCKRVLLHS  480
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	0.0	MYB family protein