PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776990.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 385aa MW: 42713.2 Da PI: 7.8959

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776990.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.1	1.8e-32	219	274	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_022776990.1 219 KQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 274 79****************************************************97 PP
2	Myb_DNA-binding	42.8	1.2e-13	221	272	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ XP_022776990.1 221 RRCWSPELHRRFLHALQQLGGShvaTPKQIRELMKvDGLTNDEVKSHLQKYR 272 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MIKMDYAQKR RRCHEYVEAL EEERRKIQVF QRELPLCLEL VTQAIEACKK EISAGSTTTD 60 YLQGQSECSE QTSNDDGPVL EEFIPIKRSF NCSEEDDEQE SHKSKGHDNN NKEKNISAAA 120 DKKKSDWLRS VQLWNNNQSP DPPLKEDAGK IGSVVEVKRN GGAFQPFRRE KTVEKSVQSA 180 VGKANASATS TSTTESESRG GNNGNTNKKE EKEGQPQRKQ RRCWSPELHR RFLHALQQLG 240 GSHVATPKQI RELMKVDGLT NDEVKSHLQK YRLHTRRPSP TVQNNANPQA PQFVVVGGIW 300 VPPPEYASLT ATTTSGETAS VTPTSGIYTP VAAPLPALPQ PSGTMVQRPQ LSQSEERGSH 360 SEGRVHSNSP STSSSTHTTT DSPEF

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MIKMDYAQKR RRCHEYVEAL EEERRKIQVF QRELPLCLEL VTQAIEACKK EISAGSTTTD  60
YLQGQSECSE QTSNDDGPVL EEFIPIKRSF NCSEEDDEQE SHKSKGHDNN NKEKNISAAA  120
DKKKSDWLRS VQLWNNNQSP DPPLKEDAGK IGSVVEVKRN GGAFQPFRRE KTVEKSVQSA  180
VGKANASATS TSTTESESRG GNNGNTNKKE EKEGQPQRKQ RRCWSPELHR RFLHALQQLG  240
GSHVATPKQI RELMKVDGLT NDEVKSHLQK YRLHTRRPSP TVQNNANPQA PQFVVVGGIW  300
VPPPEYASLT ATTTSGETAS VTPTSGIYTP VAAPLPALPQ PSGTMVQRPQ LSQSEERGSH  360
SEGRVHSNSP STSSSTHTTT DSPEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-107	G2-like family protein