PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022777081.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 318aa    MW: 36200.4 Da    PI: 6.7745
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022777081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.91e-172572148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll ++++++G g+W+  a++ g++Rt+k+c++rw++yl
   XP_022777081.1 25 RGPWTLEEDTLLTHYIARHGEGRWNMLAKCAGLKRTGKSCRLRWLNYL 72
                     89********************************************97 PP
2Myb_DNA-binding52.11.5e-1678121146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+eE++ +++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022777081.1  78 RGNLTPEEQLSILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 121
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
NTRTAMPPVT KGMSTPIEED SELRRGPWTL EEDTLLTHYI ARHGEGRWNM LAKCAGLKRT  60
GKSCRLRWLN YLKPDIKRGN LTPEEQLSIL ELHSKWGNRW SKIAQHLPGR TDNEIKNYWR  120
TRVQKQARQL NIESNSKRFL EAVRCFWIPR LLQKVEQTSS SSPFLKEMSS QSSVPSQVSD  180
CTVPSLSKFS SLSNKITDNS NYSFENSSSV TTQSLYPTNF TNISEQTEIS EHLTSPNVYG  240
HTCAYNNNQI LNGSYNIDSS GYDVEGFSLA SMSAVGSYEG SASECQMGEG NWLCNEMTDT  300
LWNMDDIWQF RELGEMSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.17e-97MYB family protein