PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022777222.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 362aa MW: 40261.3 Da PI: 6.7238

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022777222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl XP_022777222.1 14 RGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	46.7	7.3e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++ +E l+++++ lG++ W+ Ia++++ gRt++++k++w+ XP_022777222.1 67 RGSFSSQEAALIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SSQEAALIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLISHD 120 VPALASFADV HNSTPPEESF ISLNANPNLI LSAQQGQLYL SPTAPVLQSF AQHADFKPNP 180 NNYNIDLVHH HFSLTPMLPP HSNRSSFDPS WPLPFVPQHD LDHHQNQEDH VQIFSNEVLQ 240 NFSSEKLINP TTALTPYDHS LMAPPTVPKL CEILEGDICN SMPQTSVSLE NIDPVVSRLS 300 SCFPISAGSS YAHDMHTATC PMEYIDTIIT SMPSSSSSSS LSALSSGQYI TNPNLSSSSW 360 DP

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGHHSCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SSQEAALIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLISHD  120
VPALASFADV HNSTPPEESF ISLNANPNLI LSAQQGQLYL SPTAPVLQSF AQHADFKPNP  180
NNYNIDLVHH HFSLTPMLPP HSNRSSFDPS WPLPFVPQHD LDHHQNQEDH VQIFSNEVLQ  240
NFSSEKLINP TTALTPYDHS LMAPPTVPKL CEILEGDICN SMPQTSVSLE NIDPVVSRLS  300
SCFPISAGSS YAHDMHTATC PMEYIDTIIT SMPSSSSSSS LSALSSGQYI TNPNLSSSSW  360
DP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	5e-81	MYB family protein