PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022777312.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 262aa MW: 29018.8 Da PI: 7.9937

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022777312.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.3e-12	74	120	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +e+Lr+llP + +K++Ka+ L ++++ +k+L XP_022777312.1 74 KSHSEAERRRRERINAHLETLRTLLPCR-----EKMDKATLLGEVIRQVKEL 120 58***********************9.....8*********9988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MAAFSFNNNF SSGNCYSGFL DPFSRDSGPC NEGSSSVSVS QSLVLDSEKG ELVKTPLKVG 60 EKNVSEEKVI AALKSHSEAE RRRRERINAH LETLRTLLPC REKMDKATLL GEVIRQVKEL 120 KKNATEVSKA FLVPMDDDEV RVEPCVDEAN GTSSFKASIC CDYRPELLTD LRKALHALPI 180 KMVKAEISTL GSRLRNDFFF TGSRIAAHAD DAEARQFLAC SIHQALNSVL EKASTSPEYS 240 PCSRFSNKRR RIPYLDSSSS SS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	85	ERRRRE
2	248	252	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	8e-34	bHLH family protein