PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022777318.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 639aa MW: 72447.5 Da PI: 8.4346

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022777318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl XP_022777318.1 14 RGLWSPEEDEKLIRYINTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	50.2	5.8e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++ XP_022777318.1 67 RGRFTSEEEKLIISLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89******************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIN THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TSEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS 120 APPTNTASST DQHSQINYAS NQLELVNQDL TTRAVPAQET LFSSSAPLFM FDTTPLDGIQ 180 DANVRGELFH ESANLNTETW NLNQHQVQVF PPSTSFTTSM DINNYLPPLV ENMENMVPVE 240 VQSCSIEEEG EITLECLQRQ QQEFNEWVES QQCSNFLLWD NIEGQLGGEA IEPTSSNMGT 300 TLSSFPFLKK QFAFLFLSAF CNFIGHELVK FLTNVHWEGN YNYFLIKIVL MFSLTLQSTL 360 NIETADLLKQ KRLSLFEVIA EVVIARPEAK TYHHLNKRSK IPQVLLPQTR LNVNLKNFST 420 SLYVTYIYVY PKVIGLYKTI FAAASFLIAA MVTFSLSLSL CLIIPEKNRR EISKYLFQEG 480 VCYAKKDYNM AKHPEIDVPN LQVIKLMQSF KSKEYVRETF AWMHYYWYLT NDGIEFLRTY 540 LNLPSEIVPA TLKKQTKPAG RPMGPPGDRP RGPPRFDGER RFGDRDGYRG GPRGGGDFGD 600 KGGAPADYQP SFRGPGSRPA FGRGGGGYGA GPAGGAALP

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIN THGYGCWSEV PEKAGLQRCG KSCRLRWINY  60
LRPDIRRGRF TSEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS  120
APPTNTASST DQHSQINYAS NQLELVNQDL TTRAVPAQET LFSSSAPLFM FDTTPLDGIQ  180
DANVRGELFH ESANLNTETW NLNQHQVQVF PPSTSFTTSM DINNYLPPLV ENMENMVPVE  240
VQSCSIEEEG EITLECLQRQ QQEFNEWVES QQCSNFLLWD NIEGQLGGEA IEPTSSNMGT  300
TLSSFPFLKK QFAFLFLSAF CNFIGHELVK FLTNVHWEGN YNYFLIKIVL MFSLTLQSTL  360
NIETADLLKQ KRLSLFEVIA EVVIARPEAK TYHHLNKRSK IPQVLLPQTR LNVNLKNFST  420
SLYVTYIYVY PKVIGLYKTI FAAASFLIAA MVTFSLSLSL CLIIPEKNRR EISKYLFQEG  480
VCYAKKDYNM AKHPEIDVPN LQVIKLMQSF KSKEYVRETF AWMHYYWYLT NDGIEFLRTY  540
LNLPSEIVPA TLKKQTKPAG RPMGPPGDRP RGPPRFDGER RFGDRDGYRG GPRGGGDFGD  600
KGGAPADYQP SFRGPGSRPA FGRGGGGYGA GPAGGAALP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	1e-100	MYB family protein