PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022777330.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WOX

Protein Properties

Length: 380aa MW: 42091 Da PI: 7.977

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022777330.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.9	7.5e-18	53	113	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ XP_022777330.1 53 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 113 89***************99***********************************995 PP
2	Wus_type_Homeobox	112.2	2.7e-36	52	114	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k XP_022777330.1 52 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MASSNRHWPS MFKSKPCNTH HQWQHDINPS HMSSDCHKAP YTSVCEERSP EPKPRWNPKP 60 EQIRILEAIF NSGMVNPPRD EIRKIRAQLQ EYGQVGDANV FYWFQNRKSR SKHKLRNLQS 120 SKQQSQQNQQ THQTPPITNI TTITAPCSSS SSSEKSSPKG ANKSTLSLSS PNVIDVSNSP 180 TASVNQTYFH QPQNEFLNEP FFFPVQQTAA VAGFTQGFGF SELTNVIQVP DQPVGPCTSL 240 LLSEILSHGA SRKEHEENMK MQLQLSYTLT NAPSTQNIIP PTASTSTTRT VPSNNHPIQV 300 VGEPGAVEPA SAAKSTVFIN DVAFEVAVGP FNVREAFGDD AILINSAGQP VLTNEWGLTL 360 QSLQHGGFYY LVRSFSPFSL

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MASSNRHWPS MFKSKPCNTH HQWQHDINPS HMSSDCHKAP YTSVCEERSP EPKPRWNPKP  60
EQIRILEAIF NSGMVNPPRD EIRKIRAQLQ EYGQVGDANV FYWFQNRKSR SKHKLRNLQS  120
SKQQSQQNQQ THQTPPITNI TTITAPCSSS SSSEKSSPKG ANKSTLSLSS PNVIDVSNSP  180
TASVNQTYFH QPQNEFLNEP FFFPVQQTAA VAGFTQGFGF SELTNVIQVP DQPVGPCTSL  240
LLSEILSHGA SRKEHEENMK MQLQLSYTLT NAPSTQNIIP PTASTSTTRT VPSNNHPIQV  300
VGEPGAVEPA SAAKSTVFIN DVAFEVAVGP FNVREAFGDD AILINSAGQP VLTNEWGLTL  360
QSLQHGGFYY LVRSFSPFSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	6e-93	WOX family protein