PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022777354.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LSD

Protein Properties

Length: 141aa MW: 15359.3 Da PI: 5.5139

Description

LSD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022777354.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-LSD1	29.9	8.9e-10	53	77	1	25
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25 Cg+Cr lLsYPrG + +C++C tV XP_022777354.1 53 CGSCRQLLSYPRGTLLAKCSCCETV 77 ************************9 PP
2	zf-LSD1	45.5	1.2e-14	91	115	1	25
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25 C +C +lL+YP+GApsV+C++C++V XP_022777354.1 91 CDSCTVLLMYPYGAPSVKCSSCHFV 115 ***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MDNTEAEAKQ PKGDQQQGDE EEGPPPGWQS IPPQASAPQQ PLHLSSEMAQ MVCGSCRQLL 60 SYPRGTLLAK CSCCETVNFV LEAHQVGVVK CDSCTVLLMY PYGAPSVKCS SCHFVTEIGE 120 HNRRPPWSVQ QGQPTPPNVV H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21610.1	7e-42	LSD family protein