PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022777375.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 362aa MW: 41144.1 Da PI: 6.5899

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022777375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60	5.3e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl XP_022777375.1 14 KGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLERCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.7e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_022777375.1 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGRVPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGYGNWRTL PKNAGLERCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSSILS SSLYNQSQMN MSRALGVQSF VNPELLRLAT SLMSSQTKNQ 180 NQNPNFLLQN VEENQLCNSH VQKQYQPFMQ SNHLPTQVQE IPACISLNTP CSIQFSDEAQ 240 LISPNVDHFP SNLTDLSDWQ GNAMPSNLTE DYVPLPPKYN CYGSGHQTVM DPSSETSNFP 300 SNNSNHSFSF ASVLSRPSSS PTSLNSNSTY INSSCIEDER ESYCSNILKF EIPDILDVNE 360 FM

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGRVPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGYGNWRTL PKNAGLERCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSSILS SSLYNQSQMN MSRALGVQSF VNPELLRLAT SLMSSQTKNQ  180
NQNPNFLLQN VEENQLCNSH VQKQYQPFMQ SNHLPTQVQE IPACISLNTP CSIQFSDEAQ  240
LISPNVDHFP SNLTDLSDWQ GNAMPSNLTE DYVPLPPKYN CYGSGHQTVM DPSSETSNFP  300
SNNSNHSFSF ASVLSRPSSS PTSLNSNSTY INSSCIEDER ESYCSNILKF EIPDILDVNE  360
FM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-105	MYB family protein