PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022777405.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 724aa    MW: 79583.2 Da    PI: 6.083
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022777405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox629.2e-2058113156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_022777405.1  58 KKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 113
                     688999***********************************************998 PP
2START225.81.3e-702464651206
                     HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     ela +a++el+++a+++ep+Wv+       +n+de+l++f+++ +      ++ea+r+s+vv+m++++lve+l+d++ qW+  +     +a+tle
  XP_022777405.1 246 ELAVAAMEELIRMAQSGEPLWVSGEnstNVLNEDEYLRTFPRGIGpkplgLRSEASRESTVVIMNHVNLVEILMDVN-QWSSVFCgivsRAMTLE 339
                     57899******************9999899************999********************************.******99999****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     v+s+g      galq+m+ae+q++splvp R+ +fvRy++q+++g+w++vdvS+d+ ++ p    + +++++pSg+li++++ng+skv+wvehv+
  XP_022777405.1 340 VLSTGvagnynGALQVMTAEFQVPSPLVPtRENYFVRYCKQHTDGTWAVVDVSLDNLRPSP----MSKCRRRPSGCLIQELPNGYSKVIWVEHVE 430
                     ***********************************************************99....788999************************ PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r +h+++r+lv+sgla+gak+wvatl+rqce+
  XP_022777405.1 431 VDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCER 465
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 724 aa     Download sequence    
MFSPDLFESP HIFDMTHKTS ESELMEKIRD DYYETKSGTE NTDAPSGDDQ DPNQRTKKKR  60
YHRHTQRQIQ EMEAFFKECP HPDDKQRKEL SRELGLEPLQ VKFWFQNKRT QMKAQHERHE  120
NAILKAENEK LRAENNRYKE ALSNATCPNC GGPAALGEMS FDEQHLRIEN ARLREEIDRI  180
SGIAAKYVGK PLTSFPHLSS HLHSRSLGLG TSNFGTQSGF VGEMYGGDLL RSVSGPTEAD  240
KPMIVELAVA AMEELIRMAQ SGEPLWVSGE NSTNVLNEDE YLRTFPRGIG PKPLGLRSEA  300
SRESTVVIMN HVNLVEILMD VNQWSSVFCG IVSRAMTLEV LSTGVAGNYN GALQVMTAEF  360
QVPSPLVPTR ENYFVRYCKQ HTDGTWAVVD VSLDNLRPSP MSKCRRRPSG CLIQELPNGY  420
SKVIWVEHVE VDDRAVHNIY RPLVNSGLAF GAKRWVATLD RQCERLASTM ASNIPAGDLC  480
VITSPEGRKS MLKLAERMVT SFCTGVGAST AHAWTTLSAT GSDDVRVMTR KSMDDPGRPP  540
GIVLSAATSF WIPVPLKRVF DFLRDENSRS EWDILSNGGL VQEMAHIANG RDPGNCVSLL  600
RVNSANSSQS NMLILQESCS DATGSYVIYA PVDIGAMNVV LSGGDPDYVA LLPSGFAILP  660
DGPGLNGGGI LEIGSGGSLL TVAFQILVDS VPTAKLSLGS VATVNSLIKC TVERIKAAVI  720
CDNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.20.0HD-ZIP family protein