PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022921358.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 167aa    MW: 19060.8 Da    PI: 10.0918
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022921358.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.52.2e-183892256
                    T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    rk+ ++++eql+ Lee F+ + +++ +++  LA++l+L+ rqV vWFqNrRa+ k
  XP_022921358.1 38 RKKLRLSQEQLTLLEETFKLHTTLNLAQKLALAQQLNLKARQVEVWFQNRRARSK 92
                    788899***********************************************98 PP
2HD-ZIP_I/II110.98.4e-3638126189
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                     +kk+rls+eq++lLEe+F+ +++L+  +K +la++L+l++rqv+vWFqnrRAR k+kq+E+d+e+Lk+ +++lkeen rL+ke +eLr+
  XP_022921358.1  38 RKKLRLSQEQLTLLEETFKLHTTLNLAQKLALAQQLNLKARQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRS 126
                     69*************************************************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MQLQANEPSK DSSFGISRDR SSTNYNCNAI SGGLERERKK LRLSQEQLTL LEETFKLHTT  60
LNLAQKLALA QQLNLKARQV EVWFQNRRAR SKLKQTEVDC EFLKKYCERL KEENGRLKKE  120
LQELRSTKLG ASQLYIQLPK AATLTICPSC DKTTRPAAAV EAHSPPQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13642RERKKLR
28795RRARSKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.13e-35HD-ZIP family protein