PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921365.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 319aa MW: 35817.6 Da PI: 6.4067

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921365.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.7e-12	118	169	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ +++l+P++ + ++ + a+i +++++k+L+ XP_022921365.1 118 QRMTHIAVERNRRRQMNDHLNVIKSLIPTS---YIQRGDQASIIGGTIDFVKELE 169 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MGCSRQELSS LEFDEFDEAY LFTSSLDEKM PFLHMLQCVE EPFKEPSFQN LLKLQQHLSN 60 DKPWKQEVNS ASCRVSPECN QNGGLCRTQM ENAPLPTKER RKRKRLRPAK NKEEVESQRM 120 THIAVERNRR RQMNDHLNVI KSLIPTSYIQ RGDQASIIGG TIDFVKELEQ LLECLEAQRK 180 ERKGEGEGDE EGSPTSSSAT GMASNGRIGE GVCAEVKSEV GEIEVTMIQA HVNLKIKCPK 240 RQGQLLKAIV ALEDLRLSVL HLNISTSQAT ATVLYSFNLR IEDECKLGSA VQIAGAVHEI 300 LSFISDGSQV NDVKGNFRQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	106	ERRKRKRL
2	100	105	RRKRKR
3	119	130	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	3e-67	bHLH family protein