PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921383.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 295aa MW: 33666.8 Da PI: 8.0832

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921383.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.3	1.2e-52	6	130	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL++k+++++++ + i vd+++ ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++ XP_022921383.1 6 LPPGFRFHPTDEELISYYLTHKLSDSSFTS-KPIGVVDLNNNEPWDLPAKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFG- 98 79***********************999.88***********999999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 +g lvglkktLvfykgrap+g+k++Wvmheyr XP_022921383.1 99 DGVLVGLKKTLVFYKGRAPRGVKSNWVMHEYR 130 9****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MEEENLPPGF RFHPTDEELI SYYLTHKLSD SSFTSKPIGV VDLNNNEPWD LPAKASMGEK 60 EWYFFSLRDR KYPTGLRTNR ATEAGYWKTT GKDKEIFGDG VLVGLKKTLV FYKGRAPRGV 120 KSNWVMHEYR SLNNHFFKRS KEEWVVCRVF EKQNTGKKPQ QLSSCRETNS IMNEFGEIEV 180 SNLSNFSNIS AQTYENNNMV DMKMKMNMNW GAPANETASI SALPSPSSSP LNSNLSMNSL 240 LLKALQLTAF HQRGVDAQFG THHLSCFQPS SSSKVFDSST QQQQQEQPFN LDSLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	4e-88	NAC family protein