PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022921400.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 316aa    MW: 36472.9 Da    PI: 8.8512
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022921400.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP115.28.6e-36912362135
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssasec.eaesssssasns 85 
                       k+drhski T +g+RdRR+Rls+++a++fF Lqd+LG+dk+skt+eWLl qa ++ik+l             +      + ++++ +s  ++ 
  XP_022921400.1  91 SSKRDRHSKIDTLRGPRDRRMRLSLPVAREFFGLQDMLGVDKASKTVEWLLFQARHEIKKLSCHdrggngdmrsP------SiSDGEVVSGIDET 179
                     579***********************************************************9977765533221......23344444444422 PP

             TCP  86 ssg......kaaksaa.kskksqksaasalnlakesrakarararertrekmriknk 135
                       +      +++k+++ +++   +++++   lake r+kararar rt ek+ ++ k
  XP_022921400.1 180 IVNskidmkESRKATKkEKRGWVARKTTYYPLAKECREKARARARARTIEKQLQSGK 236
                     22244456433333332444556677778**********************988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MFLFNANDSI SFPDHSFLHF PSPFHDDPTL HVLQQPQNDI LLHQILLNEP PSNFVSDFGS  60
ESTRIIVDDE HHHRVHQSLI IEQPNQRKQA SSKRDRHSKI DTLRGPRDRR MRLSLPVARE  120
FFGLQDMLGV DKASKTVEWL LFQARHEIKK LSCHDRGGNG DMRSPSISDG EVVSGIDETI  180
VNSKIDMKES RKATKKEKRG WVARKTTYYP LAKECREKAR ARARARTIEK QLQSGKKTLS  240
SDQTNTNKQI EGRIQDVVRT SSSWSTQIDD QQLRTRNDET DDGLMMMGRW SQEHPFGDFQ  300
FFGKPWEPDN NHGICS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.22e-24TCP family protein