PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921402.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 319aa MW: 35945.7 Da PI: 8.4939

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921402.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.4	1.9e-11	137	180	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + ErrRRdriN+++ L++l+P++ K + a+ L +++Y+k+L+ XP_022921402.1 137 QSERRRRDRINQKLKDLQKLVPNR-----SKTDRASLLDDTIQYLKQLK 180 68*******************8.....6***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MNQWIVPKWN QSQQHEDASR SSHVHFPHKN TTFSHNLVPM AVDGHGEVVL QMASTKHSWG 60 QSEDTLESIV HSSLLRKRTR SNPEGKDETF MSGAFLESHR SFKAKNSIED LAPDDGSEDE 120 HNTKRKTSGS CSIRRTQSER RRRDRINQKL KDLQKLVPNR SKTDRASLLD DTIQYLKQLK 180 AQVQFMCSIR SDVPQMIVPL GMQQQQQQLQ VSLLAARMGL LDTASMASSS SSFPCAAACS 240 PTLLPSIISS TKPKYKLSTS AFVPPTDPFC TLLAQSMDMD LYSKMVTLYC QEVNRTPRQA 300 SKLMESQCVE GIEEDMHQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	143	KRKTSGSCSIRRTQSERRRR
2	139	144	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61270.1	5e-16	bHLH family protein