PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921488.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 361aa MW: 41141.2 Da PI: 5.934

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921488.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.9	6.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v ++G+ +W++ +++ g++R++k+c++rw +yl XP_022921488.1 14 RGLWTAEEDAKILAYVSKHGTSNWTSAPKKAGLRRCGKSCRLRWTSYL 61 788*****************************************9996 PP
2	Myb_DNA-binding	46.1	1.1e-14	69	110	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T++E+el++++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022921488.1 69 NFTPQEEELIIRLHAAIGSR-WAIIAQQLP-GRTDNDVKNYWNT 110 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MVRVPCCDKL NLKRGLWTAE EDAKILAYVS KHGTSNWTSA PKKAGLRRCG KSCRLRWTSY 60 LRPDLKHHNF TPQEEELIIR LHAAIGSRWA IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG 120 IDPVTHKPFS QILADYGNIG GLPRSTNRIG SLNRDLKTSP YMKPEQHSNS AQELFRGIDV 180 VMSTPTMLLP ETEPSIDKFM NGNVHQLNTN PSLNLLAQLQ AMQLVTEASH CTSNEPIQPH 240 FNTQAYLPSS SSSSSSSAFI WQDFLLEDAF LPSEPREHEN VAEFALNQNA FQTQNGTSKE 300 EMNKEKSEYQ YDRFEAMHCL TENDDVEASS STENTFIETL FHQEDKILFD FLNLLDEPLY 360 D

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MVRVPCCDKL NLKRGLWTAE EDAKILAYVS KHGTSNWTSA PKKAGLRRCG KSCRLRWTSY  60
LRPDLKHHNF TPQEEELIIR LHAAIGSRWA IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG  120
IDPVTHKPFS QILADYGNIG GLPRSTNRIG SLNRDLKTSP YMKPEQHSNS AQELFRGIDV  180
VMSTPTMLLP ETEPSIDKFM NGNVHQLNTN PSLNLLAQLQ AMQLVTEASH CTSNEPIQPH  240
FNTQAYLPSS SSSSSSSAFI WQDFLLEDAF LPSEPREHEN VAEFALNQNA FQTQNGTSKE  300
EMNKEKSEYQ YDRFEAMHCL TENDDVEASS STENTFIETL FHQEDKILFD FLNLLDEPLY  360
D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	7e-72	MYB family protein