PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921569.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 441aa MW: 47276.6 Da PI: 8.0547

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921569.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.4	2e-30	159	218	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCt a +Cpv+k+v+rs +d +++++tYeg+Hnh+ XP_022921569.1 159 MNDGCQWRKYGQKTAKGNPCPRAYYRCTGApSCPVRKQVQRSVDDISILITTYEGTHNHP 218 58************************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MEADALPTTA GGDEEAAPKQ DDEQHDEERI KRTKAEMREV REENERLKKR LDETMKNYET 60 LKRQVHQMGQ IRAAKKSTQT SAIGIRNDEV EEMDQMVSLT LGRRLFSNIS SPTKSDPQNV 120 GFLGLPAPPT GEDEVSRQNP PKKPRVSVRA RCDAPLVQMN DGCQWRKYGQ KTAKGNPCPR 180 AYYRCTGAPS CPVRKQVQRS VDDISILITT YEGTHNHPLP VSAMAMASTT SAAASMLLSG 240 PSSFATAAAD LHGLNSYLSN NTNSKGFYLP NSSMLSSSLN HPTITLDLTS NSPSANYPPK 300 FPLDFGSSQY SFMPWNNSNS GYGYGNASQA GHQQFSKSST PPPPLSSPLP DTIAAATKVI 360 TSDPNFHSAL AAALSSIIGG GNGSKTAPPM ASYVEEPQGN VCASSLSSQQ GSMGFEAAKS 420 LSCSTSKSPS SSPGDSRENG K

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MEADALPTTA GGDEEAAPKQ DDEQHDEERI KRTKAEMREV REENERLKKR LDETMKNYET  60
LKRQVHQMGQ IRAAKKSTQT SAIGIRNDEV EEMDQMVSLT LGRRLFSNIS SPTKSDPQNV  120
GFLGLPAPPT GEDEVSRQNP PKKPRVSVRA RCDAPLVQMN DGCQWRKYGQ KTAKGNPCPR  180
AYYRCTGAPS CPVRKQVQRS VDDISILITT YEGTHNHPLP VSAMAMASTT SAAASMLLSG  240
PSSFATAAAD LHGLNSYLSN NTNSKGFYLP NSSMLSSSLN HPTITLDLTS NSPSANYPPK  300
FPLDFGSSQY SFMPWNNSNS GYGYGNASQA GHQQFSKSST PPPPLSSPLP DTIAAATKVI  360
TSDPNFHSAL AAALSSIIGG GNGSKTAPPM ASYVEEPQGN VCASSLSSQQ GSMGFEAAKS  420
LSCSTSKSPS SSPGDSRENG K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-48	WRKY family protein