PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921578.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 365aa MW: 41021.4 Da PI: 7.8051

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921578.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178	2.5e-55	29	155	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv + ++++ ++i +vd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdk++++ XP_022921578.1 29 LPPGFRFHPTDEELISHYLFHKVMDCSFSC-RAIGDVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKDIYR- 121 79**************************.89***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfy+grapkgek++Wvmheyrle XP_022921578.1 122 GKSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 155 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MNTSKPSNMA AAAAAPGGGV LNQEDHLELP PGFRFHPTDE ELISHYLFHK VMDCSFSCRA 60 IGDVDLNKSE PWDLPWKAKM GEKEWYFFCV RDRKYPTGLR TNRATEAGYW KATGKDKDIY 120 RGKSLVGMKK TLVFYRGRAP KGEKSNWVMH EYRLEGKLSA LNLPKAARNE WVICRVFEKN 180 STGKKVDISG NEFGHSNLPP LTDSFSFDGE TKCAVQLPNN VPCFSIAMDS QRKLQPMASS 240 YNSSVFSVIP NSINSFPRNP HSNSVFPPPN QTPNLQFPTS LLLQEQQSLL RALIQNVSGG 300 NIRESFKPET DKISISQETC LTTDVNNEIS SILPNHEMGR RPLDNSQEAP PAPMAPIDLD 360 DFWNY

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MNTSKPSNMA AAAAAPGGGV LNQEDHLELP PGFRFHPTDE ELISHYLFHK VMDCSFSCRA  60
IGDVDLNKSE PWDLPWKAKM GEKEWYFFCV RDRKYPTGLR TNRATEAGYW KATGKDKDIY  120
RGKSLVGMKK TLVFYRGRAP KGEKSNWVMH EYRLEGKLSA LNLPKAARNE WVICRVFEKN  180
STGKKVDISG NEFGHSNLPP LTDSFSFDGE TKCAVQLPNN VPCFSIAMDS QRKLQPMASS  240
YNSSVFSVIP NSINSFPRNP HSNSVFPPPN QTPNLQFPTS LLLQEQQSLL RALIQNVSGG  300
NIRESFKPET DKISISQETC LTTDVNNEIS SILPNHEMGR RPLDNSQEAP PAPMAPIDLD  360
DFWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-129	NAC family protein