PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022921619.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 295aa    MW: 32481.7 Da    PI: 9.6062
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022921619.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.3e-09145191555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_022921619.1 145 HSLAERVRRQKISQRMKVLQTLVPGC----HKVTGKALMLDEIINYVQSLQ 191
                     999**********************9....566*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MNNSQFHPSP KFLPSPKFHP SPDSFALSKM NPCSWELEEA PQIPHFHHLL PPQIQSSSAQ  60
QTAHHHHLPP RILPTTTNSL PSSHSLSPSK EDPNERGGDG KRRGYKRAKA GGGRKKLKTQ  120
DHPQVSPPPG YIHVRARRGQ ATDRHSLAER VRRQKISQRM KVLQTLVPGC HKVTGKALML  180
DEIINYVQSL QSQIELLSME LASVHPIRYD FGMDNPEVFI GTPVTQVLNG SGMVSRSEQA  240
ELAYNMASCN TFQATGGGGG DSPILTAENG SFIPVDMNPS QVFLDYGNAS LQHLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-45bHLH family protein