PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022921751.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 315aa    MW: 34281.2 Da    PI: 8.2479
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022921751.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.39.7e-15102146347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + +q G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_022921751.1 102 PWTEEEHKLFLVGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKY 146
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MRSTAAVVNE SPAAETCGGG PGEIMLFGVR VVVDSMRKSV SLNNLSQYEQ PHEAADVITN  60
DSKNDLVSVN NKDDVAAGYA SADDAVPNAR GNRERERKRG VPWTEEEHKL FLVGLQQVGK  120
GDWRGISRNF VKTRTPTQVA SHAQKYFLRR SNLNRRRRRS SLFDITTDTV TAAPMVEEPT  180
KRQEIASQSH SFIPSPPPEI SKHNVIPVEQ TLPFSFGPAP LATTLTKNLM EKCGPGEVNT  240
ESDGSLKLGL KDSIFPSNQN PTSTGLNLNS NSAMESSALS LRLSLTSDQR EASSRHSTFQ  300
AMPSFNNGEG IISAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.22e-61MYB_related family protein