PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921826.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 420aa MW: 44048.3 Da PI: 6.9193

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921826.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.7e-12	218	263	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022921826.1 218 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 263 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MQPCSREMQT FNSLLNHSQI SLQDLHADAP HHLNPPPPQI PASQLHHFDP AAAASHDDFL 60 EQMLNTIPSC SWPDLNPSNP KSPWDLNPIN KPSRDISDDH HQSHITATSP AAKAAVMLQQ 120 QLLLNRGISV SAGNGVADHG LPPMPLSLGN ADLDRSQNDV VEGSCFRTPN SGGSIQSHSF 180 GAPGNGMSQT PAGGSVGVSP SQPKQKVRAR RGQATDPHSI AERLRRERIA ERMKALQELV 240 PNANKTDKAS MLDEIIDYVK FLQLQVKVLS MSRLGGAAAV APLVADVSSE GGGECMQGSG 300 AQGGGRNSNN GGGGGNQTAS SNDSMTVTEQ QVAKLMEKDM GSAMQYLQGK GLCLMPISLA 360 TAISTSTCHT RNPMMNGGGQ HPVMGTNGEG PTSPSMSVLT VQSTSMGNGS VKDAASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MQPCSREMQT FNSLLNHSQI SLQDLHADAP HHLNPPPPQI PASQLHHFDP AAAASHDDFL  60
EQMLNTIPSC SWPDLNPSNP KSPWDLNPIN KPSRDISDDH HQSHITATSP AAKAAVMLQQ  120
QLLLNRGISV SAGNGVADHG LPPMPLSLGN ADLDRSQNDV VEGSCFRTPN SGGSIQSHSF  180
GAPGNGMSQT PAGGSVGVSP SQPKQKVRAR RGQATDPHSI AERLRRERIA ERMKALQELV  240
PNANKTDKAS MLDEIIDYVK FLQLQVKVLS MSRLGGAAAV APLVADVSSE GGGECMQGSG  300
AQGGGRNSNN GGGGGNQTAS SNDSMTVTEQ QVAKLMEKDM GSAMQYLQGK GLCLMPISLA  360
TAISTSTCHT RNPMMNGGGQ HPVMGTNGEG PTSPSMSVLT VQSTSMGNGS VKDAASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	223	228	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	6e-64	bHLH family protein