PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921894.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 772aa MW: 85471.2 Da PI: 8.2248

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921894.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64.6	2.1e-20	680	759	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +W+ +e+++Li++r ++++r++ +k +++lWee+s m + g++rsp qCk+ w +l +++++ ++ekk s+++py+d++ XP_022921894.1 680 KWKPEEIKKLIQLRGKLHDRFQVAKGRMALWEEISTSMLADGINRSPGQCKSLWASLVVKFEQESKSEKK-----SKSWPYWDEM 759 7******************************************************************8.....678***99 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MLALCFLTTT SLVSRKLYLI PHLLEDGVTK LKLLLLHMAT KITLVIPALD SHTPIFASSF 60 TVELIKKRLK ENGIFIPSRL KVFKMKRRFT AGPFEIEPIR VTHSIPDCCG LVLRCADGTI 120 FHTGDWKIDE SPLDGKVFDR ETLEQLSKEG VTLMMSDSTN VLSPGRTISE SVVADALLRR 180 ISAAKGRVIT TQFASNIHRL GSVKAAADLT GRKLVFVGMS LRTYLDAAWK DGKAPIDPST 240 LVKVEDIDAY APKDLLIVTT GSQAEPRAAL NLASYGSSHS LKLSKEDMIL YSAKVIPGNE 300 SRVMKMLNRI SEIGSNIIMG KNELLHTSGH GYRGELEEVL QIVKPQHFLP IHGELLFLKE 360 HELLGRSTGI RHTTVIKNGE MLGVSHLRNR RVLSNGFTSL GMENLQLKYS DGDKAFGSSS 420 ELFVDERLKI ATDGIIVVSM EILRPLSVDG LNETGIRGKL RITTRCLWLD KGKLLDALHK 480 AAHAALSSCP VNCPLAHMER TVSELLRKMV RKYSGKRPEV IVMAVENPGG VLTEELGTRL 540 SGKSNTGIGI PALRKAVDGQ PTKSHLNSIK PNGNDDLHSE DNSSQESQGF YIEPGRLLPE 600 EDYVPSNSTE MNSFDNEGLE DFWRPFITPT SPATELAKDN EGSVQQSKNT LEITNEGEEV 660 GDDKSVKTSN SDVKPVKRNK WKPEEIKKLI QLRGKLHDRF QVAKGRMALW EEISTSMLAD 720 GINRSPGQCK SLWASLVVKF EQESKSEKKS KSWPYWDEMS GILSDSEDVA TE

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MLALCFLTTT SLVSRKLYLI PHLLEDGVTK LKLLLLHMAT KITLVIPALD SHTPIFASSF  60
TVELIKKRLK ENGIFIPSRL KVFKMKRRFT AGPFEIEPIR VTHSIPDCCG LVLRCADGTI  120
FHTGDWKIDE SPLDGKVFDR ETLEQLSKEG VTLMMSDSTN VLSPGRTISE SVVADALLRR  180
ISAAKGRVIT TQFASNIHRL GSVKAAADLT GRKLVFVGMS LRTYLDAAWK DGKAPIDPST  240
LVKVEDIDAY APKDLLIVTT GSQAEPRAAL NLASYGSSHS LKLSKEDMIL YSAKVIPGNE  300
SRVMKMLNRI SEIGSNIIMG KNELLHTSGH GYRGELEEVL QIVKPQHFLP IHGELLFLKE  360
HELLGRSTGI RHTTVIKNGE MLGVSHLRNR RVLSNGFTSL GMENLQLKYS DGDKAFGSSS  420
ELFVDERLKI ATDGIIVVSM EILRPLSVDG LNETGIRGKL RITTRCLWLD KGKLLDALHK  480
AAHAALSSCP VNCPLAHMER TVSELLRKMV RKYSGKRPEV IVMAVENPGG VLTEELGTRL  540
SGKSNTGIGI PALRKAVDGQ PTKSHLNSIK PNGNDDLHSE DNSSQESQGF YIEPGRLLPE  600
EDYVPSNSTE MNSFDNEGLE DFWRPFITPT SPATELAKDN EGSVQQSKNT LEITNEGEEV  660
GDDKSVKTSN SDVKPVKRNK WKPEEIKKLI QLRGKLHDRF QVAKGRMALW EEISTSMLAD  720
GINRSPGQCK SLWASLVVKF EQESKSEKKS KSWPYWDEMS GILSDSEDVA TE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein