PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921970.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 312aa MW: 34756.8 Da PI: 9.8239

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921970.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	82.1	1.4e-25	46	140	3	88
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........................ssssasec 73 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+L + ++sk i+WL k i++l+ + s XP_022921970.1 46 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLqiptgfspfhqqmlfppydhhhhyS------- 133 79*************************************************************6666555444444333222211110....... PP TCP 74 eaesssssasnsssg 88 s+s sss+ XP_022921970.1 134 -------SSS-SSSS 140 .......111.1111 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MLRNSKEKGF ESKEEGKYRF PKAPTSSRQW SGFRNPRIVR VSRSFGGKDR HSKVCTIRGL 60 RDRRIRLSVP TAIQLYDLQD KLKLGQPSKV IDWLPDVTKL DIDKLPPLQI PTGFSPFHQQ 120 MLFPPYDHHH HYSSSSSSSS SSSQFCNSLP PPFAVDMKGD SIEKTKIWDM DLALQGKASS 180 LTKGKWIDGS SNQHVEDYNF TPYNTYNSSQ FGNNNGVFPS QIEAPTSSSS ASALFFTPYA 240 SYITNPFESH IHFLSSNSHA LSNPFVPSAL HPFASQNLKP FSAASFNFKQ LLHAADGNGT 300 DRSNKDGTAG DS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	9e-47	TCP family protein