PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022921971.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 300aa MW: 33335.3 Da PI: 9.9496

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022921971.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	82.3	1.2e-25	34	128	3	88
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........................ssssasec 73 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+L + ++sk i+WL k i++l+ + s XP_022921971.1 34 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLqiptgfspfhqqmlfppydhhhhyS------- 121 79*************************************************************6666555444444333222221110....... PP TCP 74 eaesssssasnsssg 88 s+s sss+ XP_022921971.1 122 -------SSS-SSSS 128 .......111.1111 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MLKGKYRFPK APTSSRQWSG FRNPRIVRVS RSFGGKDRHS KVCTIRGLRD RRIRLSVPTA 60 IQLYDLQDKL KLGQPSKVID WLPDVTKLDI DKLPPLQIPT GFSPFHQQML FPPYDHHHHY 120 SSSSSSSSSS SQFCNSLPPP FAVDMKGDSI EKTKIWDMDL ALQGKASSLT KGKWIDGSSN 180 QHVEDYNFTP YNTYNSSQFG NNNGVFPSQI EAPTSSSSAS ALFFTPYASY ITNPFESHIH 240 FLSSNSHALS NPFVPSALHP FASQNLKPFS AASFNFKQLL HAADGNGTDR SNKDGTAGDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	6e-47	TCP family protein