PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922104.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 253aa    MW: 27301.1 Da    PI: 5.805
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922104.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.0004694116123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_022922104.1  94 FSCNYCRRKFFSSQALGGHQNAH 116
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
METLDFNIEA AKDSEPSSSQ EANPDHSNTG TASSSCPPSS SEVAVAVADA VPISLDLTLQ  60
FNSNDIESKG DGDGENHGET NGNKSSSAST PRVFSCNYCR RKFFSSQALG GHQNAHKRER  120
TMAKRVTRMG MFFDRYGSLA SLPLHGSALR SLGIEAHGAL HQTVLASDHR PYPGRSVGAK  180
FEHSTFGFPT FVEEYEDDVG MFWPGSFRQV AAKVDSSLGP LKSTVQISDS EFGKTIPPPP  240
RTEESSPDLT LRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.19e-35C2H2 family protein