PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922209.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 230aa MW: 26322.6 Da PI: 6.3936

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922209.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.4	5.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g++R++k+c++rw +yl XP_022922209.1 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.8	4.4e-17	70	111	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T+ E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ XP_022922209.1 70 LTEAEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 699**************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL TEAEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLIKMG 120 IDPVTHEPIQ KQPEDPKGQT ENSTGNHHCT AENDSGLENS SSITTDSGFW IDEETLWNNS 180 PPTSAKEGKF VWEESCSWLL DCEDFGIHDF GFDNFNDFEF MNTTEMEGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22680.1	2e-88	MYB family protein