PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922255.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 340aa    MW: 37731.8 Da    PI: 4.9569
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922255.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.24.5e-30176234259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers+ dp+ ++itY+geH h+
  XP_022922255.1 176 TDMWAWRKYGQKPIKGSPYPRNYYRCSSSkGCGARKQVERSNADPDSFIITYTGEHIHP 234
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MAAGNNDWDL SAVVRSCNSA AYRTTPTATA ATETDLSCLA SLTFDVDPND VAFSFPDILQ  60
PQQQQQHDGF DELHQAICFL PNSLTAAVTI APEFPTATTN RYFQEEITPI LPQPDPVEAA  120
ETAAALQNQH HHQIQPSFPP EFPNSPMVQS NIPKSRKRKN QQKRTVCHVT ADNLSTDMWA  180
WRKYGQKPIK GSPYPRNYYR CSSSKGCGAR KQVERSNADP DSFIITYTGE HIHPRPTHRN  240
CLAGSFRNRP LSSVTNKNPT GDPNPSLITT ALVGSGSSPA DSPMTPFNDD YGGGDEKEGE  300
MFEDMAIDSD DDYDDILIPN LMVRDEIFAG FDEIRRRRPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-56WRKY family protein