PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922335.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 249aa    MW: 28549.5 Da    PI: 7.5443
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922335.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.1e-1375127155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +h  +Er+RR+++ s ++ Lr+llP       ++K+s ++   ++v+YI+++q
  XP_022922335.1  75 KKIMHRDVERQRRQEMSSLYSSLRSLLPLeY---LKGKPSISDHMHETVKYIQYMQ 127
                     5789*************************77...9*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MEFNIESPIS FDLGDELFPL PSISSCIDNI SVPQFPSISP LENDKSASKR PKRSSRRNPP  60
PNASNDENPN DQKRKKIMHR DVERQRRQEM SSLYSSLRSL LPLEYLKGKP SISDHMHETV  120
KYIQYMQRRI RQLSDKRDEL KNLSGENMAV GMVETLNSSR RDSVVVRSKN GLGIQVVLDT  180
TTQHRLPVSN ILRVLAVEGL EILSCITIKV NERYLHTIEC QVESDGFYPS IDVCELQHKL  240
TNLEYLPLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.11e-25bHLH family protein