PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922354.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 247aa    MW: 26382.8 Da    PI: 4.3885
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922354.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.8e-1775124155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+G+r ++ +g+Wv+eIr+p++   +kr++lg+f t+e+Aa+a++ a+++l+g
  XP_022922354.1  75 SLYRGIR-CR-SGKWVSEIREPRK---TKRIWLGTFPTPEMAAAAYDVAALALRG 124
                     579***9.55.6*********843...5*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MGDQKLPMNE LSQTPIDPLV PSVPTSQNPN PNPNPNTQVA EPRALVQELP PPPPPPPPSS  60
MASSITSSSS TKKHSLYRGI RCRSGKWVSE IREPRKTKRI WLGTFPTPEM AAAAYDVAAL  120
ALRGDDAVLN FPASIPSYPI PASTSPIDIR AAASTAAAAS AANTLKKVEG ACSNIDDTKI  180
ITVEDCSNTT LLKTEEFVDE EEIFGMPSLL ADMAEGMMVS PPRINSPPPS DDSIENSDGT  240
ESLWSYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-37ERF family protein