PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922366.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 263aa    MW: 28738.3 Da    PI: 6.5519
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922366.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-2083132255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrd      +r r +lg+++taeeAa a++ a+ kl+g
  XP_022922366.1  83 KFRGVRRRP-WGKWAAEIRD----SdRRVRMWLGTYDTAEEAAIAYDSAAVKLRG 132
                     89*******.**********....3346*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEAPTILRKP GNFAGRTNVG SRIVRISMTD PDATDSSSSD EDAVNFTRRR VKRYVGEITI  60
GTAAGEGGRK NRKKRKMAGN VRKFRGVRRR PWGKWAAEIR DSDRRVRMWL GTYDTAEEAA  120
IAYDSAAVKL RGPTALTNFP TPPPPFSCND PSSPTNLSSP TSVLHYRTHL AECLPSDRAT  180
VNGGGAADVS PVVDFLFSDD IFKSIMLEPS FFLEYETSPI PETPWAGGGG SGETVGAAEC  240
NKKVEEDDYF EEILMGSDPL VVL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17591RKMAGNVRKFRGVRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.19e-23ERF family protein