PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922372.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 237aa    MW: 25877.3 Da    PI: 8.2073
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922372.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-19118168255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  XP_022922372.1 118 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDRAAFRIRG 168
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MNRSTKSEPD FGFLEPIRRH LLGEPEAAVA ASVVPGDQTG NFSSLIPCLE ENWGDLPLKV  60
DDSEDMLLAA VLREAVGYGW VPTLNPSSFG SFDFGVLAVK SELPESFPPV MEPERGKHYR  120
GVRQRPWGKF AAEIRDPAKN GARVWLGTYE TAEDAALAYD RAAFRIRGSR ALLNFPLRVN  180
SGEPELVRVR SKRSSPELSL SPKRRKKVGS AAEGGGVQVD NQVASLTRGG QLIVSQC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202208PKRRKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-64ERF family protein