PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922527.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 217aa    MW: 24516 Da    PI: 8.3316
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922527.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF79.81.8e-25959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n   rqvtfskRr g++KKA+EL +LCda++a+i+fs +gkl++yss
  XP_022922527.1  9 KKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSS 59
                    689**********************************************96 PP
2K-box53.31.2e-18891691999
           K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                        a+L++e     +e+Rh++Ge+Le+L ++eL+qLe+ Le +l+++ ++K+e +l++ie  ++ke  l +en++Lr+++ 
  XP_022922527.1  89 SVCANLREEFAAKTKELRHMKGEELEELGIEELKQLEKLLEIGLNRVIETKDEKFLKEIEAVKEKEALLTKENQRLRNQVR 169
                     45688999999999***************************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MTRQKIQIKK IDNIAARQVT FSKRRRGLFK KAHELATLCD ADIALIVFSA SGKLFDYSSS  60
SMHELLGRHN KLPEVNNFCQ PLFQQMEKSV CANLREEFAA KTKELRHMKG EELEELGIEE  120
LKQLEKLLEI GLNRVIETKD EKFLKEIEAV KEKEALLTKE NQRLRNQVRA LNRDEQEQQA  180
VGVGGSSLGS KSITSNSSSS PNPSSQDCDD ISLKLGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.12e-42MIKC_MADS family protein