PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922551.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 955aa MW: 106694 Da PI: 7.067

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922551.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.8	1.4e-08	216	276	22	82
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 ++gk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++++ e+ +yf XP_022922551.1 216 GSGKTRADKDREVAEYLQKHGVNRDAKTGGTKWDNMLGEFRKVYEWERGGEREQLVDKSYF 276 45678888999*************************************9976665555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 955 aa Download sequence
MGEKGEAPQQ QDYDSSSPKD PLDDSFETRP HGGGHHHHHH HHLHRRHHPH HDSSLIVASP 60 FISTPLYLPT ATATTTPFEA VNPKRTRFTA GQWKLLPSPS SSQLPIPVVG SDSSPSPSHR 120 PTGTATVAAA ASSSDTTSSP SYSPLPSTAS GQPEPAGSKG EGESQNQAQY RKGKYVSPVW 180 KPNEMLWLAR AWRIQYQGGG SDDVGIVGGQ GGRGSGSGKT RADKDREVAE YLQKHGVNRD 240 AKTGGTKWDN MLGEFRKVYE WERGGEREQL VDKSYFRLSP YERKLHRLPA SFDEQVFEEL 300 CQFMGSKMRT KPTPLLPLTR ALPPPPPFSS RSKQVFGVGY ASVDASGSPT HSCSSKEIRR 360 IGKVRMVWEE SVSLWSEEGS EQHRGGGGRI KIEGCNFLNA EDLTFFDESM VACTMESYDH 420 GPLKGLSIDR FVSGQQIKVF GRRKPPTCAT TGSHHGPPER LPLMHSTEPA ARSNTSWEYQ 480 DPTEYYVGCL RVPPTSLPSL SELSWHIQDP PSEELRLPIR KDVYAYLPQG KELMFTTTTQ 540 MLDCKSFIYE ILCPIIRTNP CITTTTRDSF IGLWDDCINR LVCEFCCMEM RIIRKPNSQS 600 TTTTHGLQDQ WPNLTGFIRH FCLWRGEETD QIKDGQPHDL DPSNSLVEKL LWTYLDIPYL 660 LGYYAVGYLV TFCALSRGHD NRIIRTDLYS LDLSTPSERL KALVPCYRIA GVLSLLADGC 720 HKLPIFSDFE RIDIGKGIVM EMTPNLVTKI FSCRTKWTAV KEIYDFLDGR IPHSEFICGS 780 SDKDLAIVFK PRVCKLRPTS YEQLIEALKN VTKALVALHD LCFMHRNVCW ENVMKRTSEE 840 EEETTTGTGE WILCGFEEAV GAPQIYPYGE ASASGRHAPE MERGLHGVKV DMWGVGFLIK 900 TCGLIGIPKM LKELQNRCMD QNPEHRLTAA DCYHHLLQLQ SSLSTATGTP GGGLM

Sequence ? help Back to Top

Protein Sequence Length: 955 aa Download sequence

MGEKGEAPQQ QDYDSSSPKD PLDDSFETRP HGGGHHHHHH HHLHRRHHPH HDSSLIVASP  60
FISTPLYLPT ATATTTPFEA VNPKRTRFTA GQWKLLPSPS SSQLPIPVVG SDSSPSPSHR  120
PTGTATVAAA ASSSDTTSSP SYSPLPSTAS GQPEPAGSKG EGESQNQAQY RKGKYVSPVW  180
KPNEMLWLAR AWRIQYQGGG SDDVGIVGGQ GGRGSGSGKT RADKDREVAE YLQKHGVNRD  240
AKTGGTKWDN MLGEFRKVYE WERGGEREQL VDKSYFRLSP YERKLHRLPA SFDEQVFEEL  300
CQFMGSKMRT KPTPLLPLTR ALPPPPPFSS RSKQVFGVGY ASVDASGSPT HSCSSKEIRR  360
IGKVRMVWEE SVSLWSEEGS EQHRGGGGRI KIEGCNFLNA EDLTFFDESM VACTMESYDH  420
GPLKGLSIDR FVSGQQIKVF GRRKPPTCAT TGSHHGPPER LPLMHSTEPA ARSNTSWEYQ  480
DPTEYYVGCL RVPPTSLPSL SELSWHIQDP PSEELRLPIR KDVYAYLPQG KELMFTTTTQ  540
MLDCKSFIYE ILCPIIRTNP CITTTTRDSF IGLWDDCINR LVCEFCCMEM RIIRKPNSQS  600
TTTTHGLQDQ WPNLTGFIRH FCLWRGEETD QIKDGQPHDL DPSNSLVEKL LWTYLDIPYL  660
LGYYAVGYLV TFCALSRGHD NRIIRTDLYS LDLSTPSERL KALVPCYRIA GVLSLLADGC  720
HKLPIFSDFE RIDIGKGIVM EMTPNLVTKI FSCRTKWTAV KEIYDFLDGR IPHSEFICGS  780
SDKDLAIVFK PRVCKLRPTS YEQLIEALKN VTKALVALHD LCFMHRNVCW ENVMKRTSEE  840
EEETTTGTGE WILCGFEEAV GAPQIYPYGE ASASGRHAPE MERGLHGVKV DMWGVGFLIK  900
TCGLIGIPKM LKELQNRCMD QNPEHRLTAA DCYHHLLQLQ SSLSTATGTP GGGLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-07	Trihelix family protein