PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922650.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 430aa MW: 46759.2 Da PI: 8.0651

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922650.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.7	1.1e-34	40	152	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++++ ++s ++a++++++++ s + XP_022922650.1 40 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTANASTQRQEQQ--SLNdvngnlls 132 79**************************************************************777775552222222222..22222344555 PP TCP 89 ...................k 89 + XP_022922650.1 133 vqrdvlnstgnrratvvgsD 152 55444444444444444331 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MEESHRQTST SSRLGMRTGR GGGGGGEIME VQGGHIVRST GRKDRHSKVC TAKGPRDRRV 60 RLSAHTAIQF YDVQDRLGYD RPSKAVDWLM KKAKAAIDEL AELPAWHPST ANASTQRQEQ 120 QSLNDVNGNL LSVQRDVLNS TGNRRATVVG SDSRVSEFPR QNLQHTRMGE GPNSSTSSFL 180 PPSLDSDSIA DTIKSFFPIG TATETSSSSI QFQNYPQDLL SRTSSQNQDL RLSLQSFQDP 240 KAIHRHHAQH QSQGHQNEHV LFSGTSPLSG FDVTTAGWSE HNLNPGEISR FPRITWNASG 300 AETGSGGGTS HGGAGIRSTG YVFNSPQLPT ALLPSQLMQP LIGENQFFSQ RGPLQSSHTP 360 SIRAWIDPSL TATDHQQHQI PPSIHQSSYT GLGFATGGFS GFHIPTRIQG EEEHDGISDK 420 PSSASSDSRH

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MEESHRQTST SSRLGMRTGR GGGGGGEIME VQGGHIVRST GRKDRHSKVC TAKGPRDRRV  60
RLSAHTAIQF YDVQDRLGYD RPSKAVDWLM KKAKAAIDEL AELPAWHPST ANASTQRQEQ  120
QSLNDVNGNL LSVQRDVLNS TGNRRATVVG SDSRVSEFPR QNLQHTRMGE GPNSSTSSFL  180
PPSLDSDSIA DTIKSFFPIG TATETSSSSI QFQNYPQDLL SRTSSQNQDL RLSLQSFQDP  240
KAIHRHHAQH QSQGHQNEHV LFSGTSPLSG FDVTTAGWSE HNLNPGEISR FPRITWNASG  300
AETGSGGGTS HGGAGIRSTG YVFNSPQLPT ALLPSQLMQP LIGENQFFSQ RGPLQSSHTP  360
SIRAWIDPSL TATDHQQHQI PPSIHQSSYT GLGFATGGFS GFHIPTRIQG EEEHDGISDK  420
PSSASSDSRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-86	TCP family protein