PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922670.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 142aa MW: 16355.9 Da PI: 10.3495

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922670.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.8	1.4e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA ELS+LCdaev +iifsstgkly+yss XP_022922670.1 10 RIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSS 59 8***********************************************96 PP
2	K-box	63.3	8.9e-22	81	141	9	69
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + ++ + +++e+a Lk++++ +q+ +R+l+Ge+L+ Ls+k+Lq+Le+qLe slk +R kK XP_022922670.1 81 NPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEMSLKGVRVKK 141 566789****************************************************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KARELSILCD AEVGLIIFSS TGKLYDYSSS 60 SIRSITDRYN KMKEEQNQLM NPVSELQFWK REAAGLKQQL HYMQECHRQL MGEELSGLSV 120 KDLQNLESQL EMSLKGVRVK KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	1e-75	MIKC_MADS family protein