PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922744.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 251aa    MW: 28024.3 Da    PI: 10.4848
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922744.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-1372118354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+++E+rRRdriN  +++Lr+l+Pk+      K++Ka+ L  A++ +k+L
  XP_022922744.1  72 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSAIDQVKDL 118
                     79*************************8.....7*************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEKNWDFSST KLEGLNWAHC NGNSSREPSL LLPFMINPQL SSSTKVQFDG FPSFSTSTEG  60
MIADVRAVSA SKSHSQAEKR RRDRINAQLA TLRKLIPKSD KMDKAALLGS AIDQVKDLKR  120
KAMEVSKNMT VPTDMDELTI DSTMVEDNNR NNIAIKVSVS CDDRPELFAE LIQVIKGLRL  180
TTIRADMASV GGRIKSILVL CNKDGEKNVC LKTVQQSLKL VLRRISSSSA ASTCRIRSKR  240
QRFFLPSHYS K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.12e-53bHLH family protein