PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922780.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 378aa MW: 41539.8 Da PI: 6.4465

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922780.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.7	1.2e-28	143	204	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK + g+++pr+YYrCt++ gC ++k+v+rs++dp+++eitY+g+H ++ XP_022922780.1 143 LDDGFCWRKYGQKGILGARHPRGYYRCTHRnlqGCLATKQVQRSDHDPNIFEITYRGTHSCT 204 59*************************99999***********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MDSFGEWDQK KKLKNELLKG KELAKQLQIH LNVRPSSSSM AAAAAAAAAV SSSSSSSVSN 60 DGGELLVQKI LSSYEKALSL LSSNGIQISE SPSSLNGSPR SEDSDREFKD HDHTNASSRT 120 RNILPTWTQK FQVSPGMALE GSLDDGFCWR KYGQKGILGA RHPRGYYRCT HRNLQGCLAT 180 KQVQRSDHDP NIFEITYRGT HSCTQVIPSA STEFQQQNHP LLPDQRVQNQ QTSPDALLSS 240 WPSLRVITEN LDTIHDPTLF HPFNYDPTSN YEVADRVESG STLRANVNFS EFSPPPPFLS 300 PTTSGSGLSY FSASSSGLSE GFIGHHQKLD LQPNKSELSE IFSSPTSASN SATPGLDFPF 360 GELQMEPTFT FHNTNFFS

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MDSFGEWDQK KKLKNELLKG KELAKQLQIH LNVRPSSSSM AAAAAAAAAV SSSSSSSVSN  60
DGGELLVQKI LSSYEKALSL LSSNGIQISE SPSSLNGSPR SEDSDREFKD HDHTNASSRT  120
RNILPTWTQK FQVSPGMALE GSLDDGFCWR KYGQKGILGA RHPRGYYRCT HRNLQGCLAT  180
KQVQRSDHDP NIFEITYRGT HSCTQVIPSA STEFQQQNHP LLPDQRVQNQ QTSPDALLSS  240
WPSLRVITEN LDTIHDPTLF HPFNYDPTSN YEVADRVESG STLRANVNFS EFSPPPPFLS  300
PTTSGSGLSY FSASSSGLSE GFIGHHQKLD LQPNKSELSE IFSSPTSASN SATPGLDFPF  360
GELQMEPTFT FHNTNFFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23810.1	9e-48	WRKY family protein