PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922787.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 331aa    MW: 37088 Da    PI: 5.6197
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922787.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.54.6e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+  l+ +v ++G g W+tI +          R+  ++k++w++
   XP_022922787.1  5 KQKWTNEEEAALKAGVVKHGAGKWRTILKDPEfssvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MGAPKQKWTN EEEAALKAGV VKHGAGKWRT ILKDPEFSSV LYLRSNVDLK DKWRNMSVMA  60
NGWGSREKAR LALKRLHAPK KDGNILARSV AVQSEDELPE AKSVSLSSDI KLIAGPKRSN  120
VRKEEEEEEE EDDDEEEETE AERTERDARY DCHRLDNLII EAITTLREPG GSNKTKITSY  180
IEDQYWAPPD FKRLLSSKLK FLTASGKLVK VKRKYRLPPV MPSSERRSSM LFLDDHQRAS  240
LRTDKDEMCI LAKAQIDLEL AKMRTMTSQE AAAAAAHAVA EAEAAIAEAE EAAREAEAAE  300
ADAEAAQSFA EAAMKTLKGR NLPKMLWSME T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.16e-84MYB_related family protein