PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922814.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 223aa    MW: 24569.8 Da    PI: 9.3314
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922814.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-1897147255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g++++eIrdp + g  +r++lg++ tae+Aa a+++a+ +++g
  XP_022922814.1  97 RYRGVRRRP-WGKYASEIRDPAKSG--ARVWLGTYETAEDAALAYDRAAFRMRG 147
                     8********.**********96654..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MELQKPDPFG DPNLVHNKAP LTYADLFSSL TDQWGDLPLK LDDSHDMVIF NSLHDAVVFV  60
LSPLHSIHPP DASSALHLDP FPTTTAPAAQ MDDKSKRYRG VRRRPWGKYA SEIRDPAKSG  120
ARVWLGTYET AEDAALAYDR AAFRMRGSKA LLNFPNRIGS DDPPPLRVSA RRREHDILVP  180
LADGSAKRRK GAANKKAEPE SSKFQVGPSQ IAALPVGEQL LVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171190RRREHDILVPLADGSAKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.11e-42ERF family protein