PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922824.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 230aa MW: 25992.4 Da PI: 8.9396

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922824.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50	6.7e-16	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l +v+ G ++W+ I++ + gR++k+c++rw++ XP_022922824.1 12 KGPWSPEEDEMLRMLVQSQGARNWSIISQSIH-GRSGKSCRLRWFNQ 57 79****************************.*********996 PP
2	Myb_DNA-binding	58	2.1e-18	64	108	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eEde + +a++++G++ W+tIar ++ gRt++ +k++w++ XP_022922824.1 64 RRAFTAEEDEVITEAHAKYGNK-WATIARLLN-GRTDNAIKNHWNST 108 678*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MGSRKGKIDR VKGPWSPEED EMLRMLVQSQ GARNWSIISQ SIHGRSGKSC RLRWFNQLCP 60 GVERRAFTAE EDEVITEAHA KYGNKWATIA RLLNGRTDNA IKNHWNSTLK RKFCSIAEKK 120 TDCASQGSTI SISNQCLSPS GSETSDSIRS SDMEPSTQLT LSLPGSELWP VTQQQCISSS 180 PVKSEEKQKG KRTCFREELL CVMQKMIKEE VRNYVAQYEE VRNGKKGIDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-63	MYB family protein