PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922867.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 197aa    MW: 21785.4 Da    PI: 7.5759
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922867.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.53e-17103154155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+++GVr+++ +g+++AeIrdp+      r++lg++++  +Aaka++ a+ +l+g
  XP_022922867.1 103 SHFRGVRRRP-WGKFAAEIRDPTRK--GIRVWLGTYDSDIDAAKAYDCAAFRLRG 154
                     78********.**********8442..4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MASSEEFLSI EFITQFLLVD SSDHQTHFQT DSPFLHSIKL EDFIFDSPIP PSPPPAEGCY  60
NDTKAGEVVD WSTPKTDMSG QASKADAEAS VAGKTDTDGK GRSHFRGVRR RPWGKFAAEI  120
RDPTRKGIRV WLGTYDSDID AAKAYDCAAF RLRGRKAVLN FPLEAGEPDP PAASGQKRGR  180
GQKWRNIPKA LKAMDEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.15e-40ERF family protein